A statistical framework for consolidating "sibling" probe sets for Affymetrix GeneChip data-2

Areas. The numbers of differentially expressed genes identified by the per-gene approach and the per-probeset approach are: a. Data Set1, 313 vs. 6, overlap: 83.3% b. Data Set2, 402 vs. 32, overlap: 96.9% c. Data Set3, MBEI pre-processing, 1828 vs. 126, overlap: 90.5% d. Data Set3, RMA pre-processing, 1592 vs. 90, overlap: 88.9% e. Data Set3, GCRMA pre-processing, 832 vs. 107, overlap: 87.9%.<p><b>Copyright information:</b></p><p>Taken from "A statistical framework for consolidating "sibling" probe sets for Affymetrix GeneChip data"</p><p>http://www.biomedcentral.com/1471-2164/9/188</p><p>BMC Genomics 2008;9():188-188.</p><p>Published online 24 Apr 2008</p><p>PMCID:PMC2397416.</p><p>